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Downloading ONDEX
ONDEX frontend latest stable release (ovtk2-IB08-packaged-distro.jar)
Who should use the ONDEX system?
In general, everyone who is interested in biological data integration and visualization tasks. However, due to the early developmental status,
we recommend only advanced users to use the ONDEX backend (core/plugins). The ONDEX frontend (ovtk) can already be used by non developers.
ONDEX requires Java SE Runtime Environment (JRE) 6 Update 10 or later to be installed (available on Windows, Linux and 64-bit Intel Macs).
The minimum memory requirement is 1GB (depending on the size of datasets to be analyzed).
To download the latest ONDEX version from the development branch just right click and Save Target As...
Packages including all dependencies, ready to run
core-[timestamp]-data.zip
plugins-[timestamp]-packaged-distro.zip
ovtk2-[timestamp]-packaged-distro.zip
To run the OVTK2 make sure that Java is installed properly, extract ovtk2-[timestamp]-packaged-distro.zip into a new directory and run run.bat
(replace [timestamp] with the actual value).
Binaries without any dependencies
core-[timestamp].jar
plugins-[timestamp].jar
ovtk2-[timestamp].jar
Project sources
core-[timestamp]-sources.jar
plugins-[timestamp]-sources.jar
ovtk2-[timestamp]-sources.jar
Maven POM files
core-[timestamp].pom
plugins-[timestamp].pom
ovtk2-[timestamp].pom
parent-[timestamp].pom
Javadoc
ONDEX Core
ONDEX Plugins
ONDEX OVTK2
Maven sites
ONDEX Core
ONDEX Plugins
ONDEX OVTK2
A list of currently supported databases can be found here.
Bugfixes and feature requests can be submitted here.
Specific questions can also be sent to the users
and developers mailing lists.
Source code repository
The source code can be accessed using the SVN repository at SourceForge from here.
Please send comments about this web site to sabr.technical at lists.ondex.org
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