Download releases
Home  |  Features  |  Backend  |  Frontend  |  Screenshots  |  Download  |  Help  |  People

Downloading ONDEX

ONDEX frontend latest stable release (ovtk2-IB08-packaged-distro.jar)

Who should use the ONDEX system?

In general, everyone who is interested in biological data integration and visualization tasks. However, due to the early developmental status, we recommend only advanced users to use the ONDEX backend (core/plugins). The ONDEX frontend (ovtk) can already be used by non developers.

Requirements (Development branch)

ONDEX requires Java SE Runtime Environment (JRE) 6 Update 10 or later to be installed (available on Windows, Linux and 64-bit Intel Macs). The minimum memory requirement is 1GB (depending on the size of datasets to be analyzed).

Download (Development branch)

To download the latest ONDEX version from the development branch just right click and Save Target As...

Packages including all dependencies, ready to run

  • core-[timestamp]-data.zip
  • plugins-[timestamp]-packaged-distro.zip
  • ovtk2-[timestamp]-packaged-distro.zip

    • To run the OVTK2 make sure that Java is installed properly, extract ovtk2-[timestamp]-packaged-distro.zip into a new directory and run run.bat (replace [timestamp] with the actual value).

    Binaries without any dependencies

  • core-[timestamp].jar
  • plugins-[timestamp].jar
  • ovtk2-[timestamp].jar

    • Project sources

  • core-[timestamp]-sources.jar
  • plugins-[timestamp]-sources.jar
  • ovtk2-[timestamp]-sources.jar

    • Maven POM files

  • core-[timestamp].pom
  • plugins-[timestamp].pom
  • ovtk2-[timestamp].pom
  • parent-[timestamp].pom

    • Documentation (Development branch)

    Javadoc

  • ONDEX Core
  • ONDEX Plugins
  • ONDEX OVTK2

    • Maven sites

  • ONDEX Core
  • ONDEX Plugins
  • ONDEX OVTK2

    • A list of currently supported databases can be found here.

    Bugfixes and feature requests can be submitted here. Specific questions can also be sent to the users and developers mailing lists.

    Source code repository

    The source code can be accessed using the SVN repository at SourceForge from here.

    Please send comments about this web site to sabr.technical at lists.ondex.org

    		   


    ONDEX DB schema and FastCircle Layout example